Porphyrobacter sp. LM 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. LM 6 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NZ_CP017113.1, which provides a reference for genomic studies and further research into its characteristics and potential applications. The traits of Porphyrobacter sp. LM 6 suggest that it may play a role in specific ecological niches, possibly related to its metabolic capabilities. While specific metabolic pathways and environmental interactions are not detailed in the provided data, the presence of a single replicon often implies a level of specialization that could be advantageous in certain habitats, such as those with limited resources or specific nutrient profiles. Understanding the genomic configuration of Porphyrobacter sp. LM 6 can provide insights into its biological functions and ecological roles. The single replicon structure may facilitate rapid adaptation and growth under changing environmental conditions, which is a significant advantage for survival in diverse ecological contexts. Further research and exploration of this organism could illuminate its potential contributions to microbial communities and its interactions within those ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. LM 6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. LM 6 chromosome, complete genome.

Gene Summary

Adenine Count

526847 bp

Thymine Count

524335 bp

Guanine Count

961925 bp

Cytosine Count

966150 bp

Genome Length

2979257 bp

Protein-coding Genes

2836 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit betaBG023_RS01805Not AvailablePositive351625 - 35190310657.5
cation:proton antiporterBG023_RS01810Not AvailableNegative352193 - 35386357107.7
Trna-leuNot AvailableNot AvailablePositive353972 - 354053Not Available
pilz domain-containing proteinBG023_RS01820Not AvailablePositive354197 - 35484423277.9
peptide-methionine (r)-s-oxide reductase msrbBG023_RS01825Not AvailableNegative354854 - 35535417961.4
cytochrome p450BG023_RS01830Not AvailableNegative355438 - 35679652006.2
abc transporter permeaseBG023_RS01835Not AvailableNegative356897 - 35817745329.4
abc transporter atp-binding proteinBG023_RS01840Not AvailableNegative358174 - 35918436010.4
trna epoxyqueuosine(34) reductase quegBG023_RS01845Not AvailablePositive359231 - 36028337719.0
nad(p)/fad-dependent oxidoreductaseBG023_RS01850Not AvailableNegative360276 - 36152344055.9

Displaying genes 411 – 420 of 2914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.