Porphyrobacter sp. LM 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. LM 6 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NZ_CP017113.1, which provides a reference for genomic studies and further research into its characteristics and potential applications. The traits of Porphyrobacter sp. LM 6 suggest that it may play a role in specific ecological niches, possibly related to its metabolic capabilities. While specific metabolic pathways and environmental interactions are not detailed in the provided data, the presence of a single replicon often implies a level of specialization that could be advantageous in certain habitats, such as those with limited resources or specific nutrient profiles. Understanding the genomic configuration of Porphyrobacter sp. LM 6 can provide insights into its biological functions and ecological roles. The single replicon structure may facilitate rapid adaptation and growth under changing environmental conditions, which is a significant advantage for survival in diverse ecological contexts. Further research and exploration of this organism could illuminate its potential contributions to microbial communities and its interactions within those ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. LM 6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. LM 6 chromosome, complete genome.

Gene Summary

Adenine Count

526847 bp

Thymine Count

524335 bp

Guanine Count

961925 bp

Cytosine Count

966150 bp

Genome Length

2979257 bp

Protein-coding Genes

2836 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphodiester phosphodiesterase family proteinBG023_RS00470Not AvailablePositive83232 - 8418234668.8
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigBG023_RS00475Not AvailableNegative84259 - 8499625767.8
aspartate kinaseBG023_RS00480Not AvailablePositive85049 - 8632045214.4
helix-turn-helix domain-containing proteinBG023_RS00485Not AvailablePositive86425 - 8709323230.1
ggdef domain-containing proteinBG023_RS00490Not AvailablePositive87372 - 8828031910.4
formate-dependent phosphoribosylglycinamide formyltransferaseBG023_RS00495Not AvailablePositive88316 - 8951242564.0
nitronate monooxygenase family proteinBG023_RS00500Not AvailablePositive89524 - 9053735175.8
formyltetrahydrofolate deformylaseBG023_RS00505Not AvailablePositive90539 - 9140532137.4
glyoxalase/bleomycin resistance/extradiol dioxygenase family proteinBG023_RS00510Not AvailablePositive91455 - 9185615035.8
beta-lactamase hydrolase domain-containing proteinBG023_RS00515Not AvailableNegative91853 - 9231116435.4

Displaying genes 141 – 150 of 2914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.