Porphyrobacter sp. LM 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. LM 6 is characterized by possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number NZ_CP017113.1, which provides a reference for genomic studies and further research into its characteristics and potential applications. The traits of Porphyrobacter sp. LM 6 suggest that it may play a role in specific ecological niches, possibly related to its metabolic capabilities. While specific metabolic pathways and environmental interactions are not detailed in the provided data, the presence of a single replicon often implies a level of specialization that could be advantageous in certain habitats, such as those with limited resources or specific nutrient profiles. Understanding the genomic configuration of Porphyrobacter sp. LM 6 can provide insights into its biological functions and ecological roles. The single replicon structure may facilitate rapid adaptation and growth under changing environmental conditions, which is a significant advantage for survival in diverse ecological contexts. Further research and exploration of this organism could illuminate its potential contributions to microbial communities and its interactions within those ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. LM 6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. LM 6 chromosome, complete genome.

Gene Summary

Adenine Count

526847 bp

Thymine Count

524335 bp

Guanine Count

961925 bp

Cytosine Count

966150 bp

Genome Length

2979257 bp

Protein-coding Genes

2836 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBG023_RS04750Not AvailableNegative986527 - 98692813943.1
sspb family proteinBG023_RS04755Not AvailableNegative986934 - 98741917355.3
imidazoleglycerol-phosphate dehydratase hisbBG023_RS04760Not AvailablePositive987557 - 98817722447.5
ycii family proteinBG023_RS04765Not AvailablePositive988170 - 98846610633.8
imidazole glycerol phosphate synthase subunit hishBG023_RS04770Not AvailablePositive988459 - 98908522110.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseBG023_RS04775Not AvailablePositive989186 - 98991725559.6
imidazole glycerol phosphate synthase subunit hisfBG023_RS04780Not AvailablePositive989914 - 99067826420.4
phosphoribosyl-atp diphosphataseBG023_RS04785Not AvailablePositive990693 - 99100711092.3
histidine triad nucleotide-binding proteinBG023_RS04790Not AvailablePositive991007 - 99138714009.7
ybgc/fadm family acyl-coa thioesteraseBG023_RS04795Not AvailablePositive991477 - 99192616973.2

Displaying genes 1011 – 1020 of 2914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.