Rhizobium gallicum strain IE4872

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium gallicum strain IE4872 is characterized as a rod-shaped bacterium that possesses flagella, which contribute to its motility. The presence of flagella is a significant trait, facilitating the bacterium's movement in various environments, potentially aiding in its interactions with plant roots. This strain is notable for having three replicons, an important genomic feature that can influence its adaptability and survival in diverse conditions. The presence of multiple replicons may allow for greater genetic flexibility, which can be advantageous in symbiotic relationships with plants, particularly in nitrogen fixation processes. The strain is cataloged under several accessions, including NZ_CP017103.1, NZ_CP017105.1, and NZ_CP017104.1, indicating its availability in genomic databases for further study and characterization. These accessions provide a basis for researchers to explore the genetic and functional properties of R. gallicum strain IE4872. In summary, Rhizobium gallicum strain IE4872 displays significant motility through its rod shape and flagella, alongside a complex genomic structure with three replicons. These traits suggest that it may play a vital role in symbiotic relationships, particularly in enhancing nitrogen availability in soil, which is crucial for plant growth and ecosystem health. The understanding of these traits can aid in the exploration of this bacterium’s potential applications in sustainable agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium gallicum
Strainstrain IE4872

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium gallicum strain IE4872
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete

Gene Summary

Adenine Count

486218 bp

Thymine Count

487338 bp

Guanine Count

708691 bp

Cytosine Count

706119 bp

Genome Length

2388366 bp

Protein-coding Genes

2310 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenase catalytic domain-containing proteinIE4872_RS26530Not AvailablePositive287629 - 28873539431.2
duf3861 domain-containing proteinIE4872_RS26535Not AvailablePositive288746 - 28902110498.6
integraseIE4872_RS26540Not AvailablePositive289074 - 28991030950.6
s-(hydroxymethyl)glutathione synthaseIE4872_RS26545Not AvailablePositive289971 - 29054320356.4
class i sam-dependent methyltransferaseIE4872_RS26555Not AvailableNegative291915 - 29280831032.9
tetr/acrr family transcriptional regulatorIE4872_RS26560Not AvailableNegative292843 - 29349023378.9
nad(p)/fad-dependent oxidoreductaseIE4872_RS26570Not AvailablePositive293691 - 29458431650.7
integraseIE4872_RS26575Not AvailablePositive294597 - 29501014904.7
inositol 2-dehydrogenaseIE4872_RS26580Not AvailablePositive295052 - 29604434923.4
hypothetical proteinIE4872_RS39545Not AvailablePositive296157 - 2962945295.48

Displaying genes 281 – 290 of 2936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.