Cutibacterium avidum strain DPC 6544

RodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Cutibacterium

Description

Cutibacterium avidum strain DPC 6544 is a Gram-positive, non-motile rod bacterium classified as a facultative anaerobe. This strain is categorized as a chemoheterotroph, deriving its energy from organic compounds. It is mesophilic, thriving within a temperature range suitable for growth in a variety of environments, including those associated with human hosts (Homo sapiens). One of the significant health implications of C. avidum strain DPC 6544 is its association with orthopedic infections. It is implicated in periprosthetic joint infections (PJI) and orthopedic device-related infections (ODRI), particularly in cases following hip arthroplasty. This highlights the strain's relevance in clinical settings, specifically regarding infections associated with implanted medical devices. The strain possesses one replicon and has an accession number of NZ_CP016954.1, which aids in its identification and characterization within microbial databases. Notably, C. avidum is non-sporulating, which may influence its survival strategies and interactions within host environments. The presence of flagella in this strain, despite its non-motility, suggests potential complexities in its biological functions or in interactions with host immune responses. The ecological role of C. avidum strain DPC 6544, particularly in the context of human health and infection, underscores the importance of understanding its pathogenic potential, especially in the realm of orthopedic medicine. The strain's ability to thrive in various habitats and its association with specific infections highlights the need for continued research into its biology and interactions within the human microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusCutibacterium
SpeciesCutibacterium avidum
Strainstrain DPC 6544

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Cutibacterium avidum strain DPC 6544
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Cutibacterium avidum strain DPC 6544 chromosome, complete genome.

Gene Summary

Adenine Count

498789 bp

Thymine Count

499555 bp

Guanine Count

868140 bp

Cytosine Count

863364 bp

Genome Length

2729848 bp

Protein-coding Genes

2431 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-amylase family proteinBFS79_RS02590Not AvailablePositive578869 - 58078272507.7
30s ribosomal protein s20BFS79_RS02595Not AvailablePositive580928 - 5811949760.91
dna polymerase iii subunit deltaBFS79_RS02600Not AvailableNegative581381 - 58237935239.2
dead/deah box helicaseBFS79_RS02605Not AvailableNegative582412 - 58412763251.5
comec/rec2 family competence proteinBFS79_RS02610Not AvailableNegative584274 - 58655678591.2
helix-hairpin-helix domain-containing proteinBFS79_RS02615Not AvailableNegative586597 - 58745128803.1
leucine--trna ligaseBFS79_RS02620Not AvailableNegative587604 - 59008492784.3
vit family proteinBFS79_RS02625Not AvailablePositive590227 - 59105428355.1
duf4192 domain-containing proteinBFS79_RS02630Not AvailableNegative591074 - 59207835988.2
sseb family proteinBFS79_RS13490Not AvailableNegative592250 - 59254010028.0

Displaying genes 521 – 530 of 2489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Orthopedic device-related infectionsCausesPMC10434181
Orthopedic device-related infection (odri)CausesPMC10434181
OdriCausesPMC10434181
Periprosthetic joint infectionsCausesPMC7852298
PjiCausesPMC7852298
Hip arthroplasty infectionsCausesPMC7852298

Displaying health effects 1 – 6 of 6 in total