Cutibacterium avidum strain DPC 6544

RodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Cutibacterium

Description

Cutibacterium avidum strain DPC 6544 is a Gram-positive, non-motile rod bacterium classified as a facultative anaerobe. This strain is categorized as a chemoheterotroph, deriving its energy from organic compounds. It is mesophilic, thriving within a temperature range suitable for growth in a variety of environments, including those associated with human hosts (Homo sapiens). One of the significant health implications of C. avidum strain DPC 6544 is its association with orthopedic infections. It is implicated in periprosthetic joint infections (PJI) and orthopedic device-related infections (ODRI), particularly in cases following hip arthroplasty. This highlights the strain's relevance in clinical settings, specifically regarding infections associated with implanted medical devices. The strain possesses one replicon and has an accession number of NZ_CP016954.1, which aids in its identification and characterization within microbial databases. Notably, C. avidum is non-sporulating, which may influence its survival strategies and interactions within host environments. The presence of flagella in this strain, despite its non-motility, suggests potential complexities in its biological functions or in interactions with host immune responses. The ecological role of C. avidum strain DPC 6544, particularly in the context of human health and infection, underscores the importance of understanding its pathogenic potential, especially in the realm of orthopedic medicine. The strain's ability to thrive in various habitats and its association with specific infections highlights the need for continued research into its biology and interactions within the human microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusCutibacterium
SpeciesCutibacterium avidum
Strainstrain DPC 6544

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Cutibacterium avidum strain DPC 6544
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Cutibacterium avidum strain DPC 6544 chromosome, complete genome.

Gene Summary

Adenine Count

498789 bp

Thymine Count

499555 bp

Guanine Count

868140 bp

Cytosine Count

863364 bp

Genome Length

2729848 bp

Protein-coding Genes

2431 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdBFS79_RS10525Not AvailablePositive2341612 - 234260735216.8
riboflavin synthaseBFS79_RS10530Not AvailablePositive2342616 - 234321521206.4
3,4-dihydroxy-2-butanone-4-phosphate synthaseBFS79_RS10535Not AvailablePositive2343209 - 234450446027.4
6,7-dimethyl-8-ribityllumazine synthaseBFS79_RS10540Not AvailablePositive2344507 - 234502217450.5
phosphoribosylglycinamide formyltransferaseBFS79_RS10545Not AvailablePositive2345032 - 234566122422.9
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseBFS79_RS10550Not AvailablePositive2345658 - 234720854725.5
hypothetical proteinBFS79_RS13130Not AvailableNegative2347286 - 234760611405.4
sseb family proteinBFS79_RS10560Not AvailableNegative2347916 - 235041787233.1
sseb family proteinBFS79_RS10565Not AvailablePositive2350488 - 235150937197.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseBFS79_RS10570Not AvailablePositive2351524 - 235238730062.1

Displaying genes 2141 – 2150 of 2489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Orthopedic device-related infectionsCausesPMC10434181
Orthopedic device-related infection (odri)CausesPMC10434181
OdriCausesPMC10434181
Periprosthetic joint infectionsCausesPMC7852298
PjiCausesPMC7852298
Hip arthroplasty infectionsCausesPMC7852298

Displaying health effects 1 – 6 of 6 in total