Cutibacterium avidum strain DPC 6544

RodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Cutibacterium

Description

Cutibacterium avidum strain DPC 6544 is a Gram-positive, non-motile rod bacterium classified as a facultative anaerobe. This strain is categorized as a chemoheterotroph, deriving its energy from organic compounds. It is mesophilic, thriving within a temperature range suitable for growth in a variety of environments, including those associated with human hosts (Homo sapiens). One of the significant health implications of C. avidum strain DPC 6544 is its association with orthopedic infections. It is implicated in periprosthetic joint infections (PJI) and orthopedic device-related infections (ODRI), particularly in cases following hip arthroplasty. This highlights the strain's relevance in clinical settings, specifically regarding infections associated with implanted medical devices. The strain possesses one replicon and has an accession number of NZ_CP016954.1, which aids in its identification and characterization within microbial databases. Notably, C. avidum is non-sporulating, which may influence its survival strategies and interactions within host environments. The presence of flagella in this strain, despite its non-motility, suggests potential complexities in its biological functions or in interactions with host immune responses. The ecological role of C. avidum strain DPC 6544, particularly in the context of human health and infection, underscores the importance of understanding its pathogenic potential, especially in the realm of orthopedic medicine. The strain's ability to thrive in various habitats and its association with specific infections highlights the need for continued research into its biology and interactions within the human microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusCutibacterium
SpeciesCutibacterium avidum
Strainstrain DPC 6544

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Cutibacterium avidum strain DPC 6544
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Cutibacterium avidum strain DPC 6544 chromosome, complete genome.

Gene Summary

Adenine Count

498789 bp

Thymine Count

499555 bp

Guanine Count

868140 bp

Cytosine Count

863364 bp

Genome Length

2729848 bp

Protein-coding Genes

2431 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBFS79_RS12800Not AvailablePositive1070109 - 107101131744.2
abc transporter atp-binding proteinBFS79_RS04900Not AvailablePositive1071835 - 107293539666.8
hypothetical proteinBFS79_RS04905Not AvailablePositive1073222 - 107512068197.6
class i sam-dependent dna methyltransferaseBFS79_RS04910Not AvailablePositive1075120 - 107681462261.6
restriction endonuclease subunit sBFS79_RS04915Not AvailablePositive1076814 - 107798941891.3
hypothetical proteinBFS79_RS04920Not AvailablePositive1078045 - 107873725366.9
imma/irre family metallo-endopeptidaseBFS79_RS04925Not AvailablePositive1078734 - 107989142197.4
type i restriction endonuclease subunit rBFS79_RS04930Not AvailablePositive1079888 - 1083049117165.0
hypothetical proteinBFS79_RS04935Not AvailablePositive1083100 - 108420643054.5
hypothetical proteinBFS79_RS04940Not AvailableNegative1084540 - 108489612848.3

Displaying genes 991 – 1000 of 2489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Orthopedic device-related infectionsCausesPMC10434181
Orthopedic device-related infection (odri)CausesPMC10434181
OdriCausesPMC10434181
Periprosthetic joint infectionsCausesPMC7852298
PjiCausesPMC7852298
Hip arthroplasty infectionsCausesPMC7852298

Displaying health effects 1 – 6 of 6 in total