Serratia surfactantfaciens strain YD25

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia surfactantfaciens strain YD25 is a gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The accession number for this strain is NZ_CP016948.1, which provides a reference for genomic data and additional research. The motility afforded by its flagella suggests potential ecological roles in diverse habitats, allowing Serratia surfactantfaciens YD25 to navigate through different media, which can be crucial for survival in fluctuating environmental conditions. As a member of the Serratia genus, this strain may be involved in various biogeochemical processes, including the degradation of organic compounds and potential interactions with other microorganisms. Understanding the traits of Serratia surfactantfaciens YD25 can provide insights into its ecological niche and potential applications in bioremediation or agriculture, where motile bacteria play significant roles in nutrient cycling and organic matter decomposition. The combination of its gram-negative cell wall structure and motility may also influence its interactions with eukaryotic organisms and other microbial communities, highlighting the importance of this strain in microbiological and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia surfactantfaciens
Strainstrain YD25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia surfactantfaciens strain YD25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia surfactantfaciens strain YD25 chromosome, complete

Gene Summary

Adenine Count

1037806 bp

Thymine Count

1029388 bp

Guanine Count

1524394 bp

Cytosine Count

1526056 bp

Genome Length

5117644 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen-iii synthaseATE40_RS21630Not AvailableNegative4633890 - 463463027219.7
hydroxymethylbilane synthaseATE40_RS21635Not AvailableNegative4634627 - 463556834044.2
class i adenylate cyclaseATE40_RS21640Not AvailablePositive4635885 - 463843797114.7
iron donor protein cyayATE40_RS21645Not AvailableNegative4638474 - 463879411980.8
lps translocon maturation chaperone lptmATE40_RS21650Not AvailablePositive4638873 - 46390797288.84
diaminopimelate epimeraseATE40_RS21655Not AvailablePositive4639151 - 463997530239.4
duf484 domain-containing proteinATE40_RS21660Not AvailablePositive4639972 - 464068526786.3
tyrosine recombinase xercATE40_RS21665Not AvailablePositive4640682 - 464159334057.3
5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigbATE40_RS21670Not AvailablePositive4641593 - 464230926899.9
dna helicase iiATE40_RS21675Not AvailablePositive4642388 - 464455081942.6

Displaying genes 4421 – 4430 of 4888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.