Serratia surfactantfaciens strain YD25

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia surfactantfaciens strain YD25 is a gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The accession number for this strain is NZ_CP016948.1, which provides a reference for genomic data and additional research. The motility afforded by its flagella suggests potential ecological roles in diverse habitats, allowing Serratia surfactantfaciens YD25 to navigate through different media, which can be crucial for survival in fluctuating environmental conditions. As a member of the Serratia genus, this strain may be involved in various biogeochemical processes, including the degradation of organic compounds and potential interactions with other microorganisms. Understanding the traits of Serratia surfactantfaciens YD25 can provide insights into its ecological niche and potential applications in bioremediation or agriculture, where motile bacteria play significant roles in nutrient cycling and organic matter decomposition. The combination of its gram-negative cell wall structure and motility may also influence its interactions with eukaryotic organisms and other microbial communities, highlighting the importance of this strain in microbiological and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia surfactantfaciens
Strainstrain YD25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia surfactantfaciens strain YD25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia surfactantfaciens strain YD25 chromosome, complete

Gene Summary

Adenine Count

1037806 bp

Thymine Count

1029388 bp

Guanine Count

1524394 bp

Cytosine Count

1526056 bp

Genome Length

5117644 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyse family translocatorATE40_RS21050Not AvailableNegative4501269 - 450187721934.6
plp-dependent aminotransferase family proteinATE40_RS21055Not AvailablePositive4502020 - 450348653505.0
yibl family ribosome-associated proteinATE40_RS21060Not AvailablePositive4503560 - 450392213363.4
class i sam-dependent methyltransferaseATE40_RS21065Not AvailableNegative4503933 - 450471228899.7
6-hydroxyaminopurine reductaseATE40_RS21070Not AvailableNegative4504816 - 450548725081.8
methyl-accepting chemotaxis proteinATE40_RS21075Not AvailableNegative4505586 - 450751469487.5
superoxide dismutaseATE40_RS21080Not AvailableNegative4507640 - 450826023265.3
formate dehydrogenase-n subunit alphaATE40_RS21090Not AvailablePositive4508689 - 4511736112715.0
formate dehydrogenase subunit betaATE40_RS21095Not AvailablePositive4511749 - 451265132912.8
formate dehydrogenase cytochrome b556 subunitATE40_RS21100Not AvailablePositive4512648 - 451328324481.5

Displaying genes 4301 – 4310 of 4888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.