Xanthomonas hortorum strain B07-007

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum strain B07-007 is characterized as a rod-shaped bacterium. This strain possesses flagella, indicating its capability for motility. It contains a single replicon, which is significant for its genetic organization and replication processes. The accession number for this strain is NZ_CP016878.1, which allows for its identification and retrieval from genomic databases. The presence of flagella in Xanthomonas hortorum strain B07-007 suggests that it may have enhanced mobility, which can be advantageous in various environments, particularly in relation to its capabilities as a phytopathogen. Rod-shaped bacteria like Xanthomonas often exhibit diverse ecological roles, including those that can lead to plant disease. Understanding the traits of such strains can provide insights into their ecological interactions and pathogenic potential. In summary, Xanthomonas hortorum strain B07-007, with its rod shape, motility due to flagella, and singular replicon, is a notable member of its genus. Its traits may facilitate its movement within plant hosts and contribute to its role in plant pathology, highlighting the ecological significance of understanding such bacterial strains in the context of agriculture and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainstrain B07-007

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum strain B07-007
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum strain B07-007 chromosome, complete genome.

Gene Summary

Adenine Count

938728 bp

Thymine Count

940827 bp

Guanine Count

1649277 bp

Cytosine Count

1646417 bp

Genome Length

5175249 bp

Protein-coding Genes

4292 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pdr/vanb family oxidoreductaseXJ27_RS18415Not AvailableNegative4064763 - 406574635767.6
gntr family transcriptional regulatorXJ27_RS18420Not AvailableNegative4065739 - 406654228252.1
aromatic ring-hydroxylating dioxygenase subunit alphaXJ27_RS18425Not AvailableNegative4066564 - 406764040116.5
coa transferase subunit aXJ27_RS18430Not AvailablePositive4067897 - 406876031378.5
coa-transferase subunit betaXJ27_RS18435Not AvailablePositive4068757 - 406954527327.4
3-oxoadipyl-coa thiolaseXJ27_RS18440Not AvailablePositive4069542 - 407075041525.0
protocatechuate 3,4-dioxygenase subunit betaXJ27_RS18445Not AvailablePositive4070862 - 407159027195.1
protocatechuate 3,4-dioxygenase subunit alphaXJ27_RS18450Not AvailablePositive4071595 - 407215820250.8
3-carboxy-cis,cis-muconate cycloisomeraseXJ27_RS18455Not AvailablePositive4072246 - 407362548352.4
3-oxoadipate enol-lactonaseXJ27_RS18460Not AvailablePositive4073640 - 407442228450.7

Displaying genes 3581 – 3590 of 4469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.