Streptomyces olivaceus strain KLBMP 5084

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces olivaceus strain KLBMP 5084 is a spore-forming bacterium primarily found in the habitat of tomato seeds (Solanum lycopersicum). This species thrives under aerobic conditions and exhibits mesophilic characteristics, with an optimal growth temperature of 29°C. The strain possesses true flagella, suggesting that it has the potential for motility, which may play a role in its ecological interactions within its habitat. Streptomyces olivaceus KLBMP 5084 is characterized by having a single replicon, which is indicative of its genomic structure. In terms of ecological insight, the presence of Streptomyces olivaceus strain KLBMP 5084 in tomato seeds suggests a potential role in the soil microbiome and plant health. Given that Streptomyces species are known for their ability to produce various bioactive compounds, including antibiotics, this strain could contribute to the suppression of soil-borne pathogens that affect tomato plants. This relationship emphasizes the importance of microbial communities in agriculture, particularly in promoting the health and growth of crops such as tomatoes. Overall, Streptomyces olivaceus strain KLBMP 5084 exemplifies the intricate connections between microorganisms and their plant hosts, highlighting the significance of these bacteria in agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces olivaceus
Strainstrain KLBMP 5084

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces olivaceus strain KLBMP 5084
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitattomato seeds
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces olivaceus strain KLBMP 5084 chromosome, complete

Gene Summary

Adenine Count

1127865 bp

Thymine Count

1129436 bp

Guanine Count

2954970 bp

Cytosine Count

2967989 bp

Genome Length

8180260 bp

Protein-coding Genes

7045 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbBC342_RS05370Not AvailableNegative1236845 - 123791838066.7
holliday junction branch migration protein ruvaBC342_RS05375Not AvailableNegative1238002 - 123860720652.9
crossover junction endodeoxyribonuclease ruvcBC342_RS05380Not AvailableNegative1238604 - 123917019754.0
yebc/pmpr family dna-binding transcriptional regulatorBC342_RS05385Not AvailableNegative1239286 - 124003826790.5
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtBC342_RS05390Not AvailableNegative1240088 - 124069621223.5
pyridoxal 5'-phosphate synthase lyase subunit pdxsBC342_RS05395Not AvailableNegative1240708 - 124161932080.4
membrane proteinBC342_RS05400Not AvailableNegative1241811 - 124235319668.6
gnat family n-acetyltransferaseBC342_RS05405Not AvailableNegative1242518 - 124305719538.5
glycosyltransferase family 4 proteinBC342_RS05410Not AvailableNegative1243228 - 124439141724.8
phosphatidylinositol mannoside acyltransferaseBC342_RS05415Not AvailableNegative1244388 - 124534134061.8

Displaying genes 1101 – 1110 of 7135 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0014510Desferrioxamine X2C24H42N6O9Chemical structure of Desferrioxamine X2NULL
Average558.633Da
Monoisotopic558.301326956Da
BASm0015337Desferrioxamine Et1C26H46N6O10Chemical structure of Desferrioxamine Et1NULL
Average602.686Da
Monoisotopic602.327541705Da
BASm0015578Desferrioxamine X4C29H52N6O9Chemical structure of Desferrioxamine X4NULL
Average628.768Da
Monoisotopic628.379577278Da
BASm0016525Desferrioxamine Te1C26H46N6O9SChemical structure of Desferrioxamine Te1NULL
Average618.75Da
Monoisotopic618.304698259Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.