Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis


Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaA1sIA105_RS00005Not AvailablePositive113 - 151652046.4
dna polymerase iii subunit betaA1sIA105_RS00010Not AvailablePositive1883 - 301339868.6
dna replication/repair protein recfA1sIA105_RS00015Not AvailablePositive3027 - 411240131.8
duf721 domain-containing proteinA1sIA105_RS00020Not AvailablePositive4109 - 457616918.1
molecular chaperone dnakA1sIA105_RS00025Not AvailablePositive4728 - 656365188.0
nucleotide exchange factor grpeA1sIA105_RS00030Not AvailablePositive6563 - 706318296.4
dnaj c-terminal domain-containing proteinA1sIA105_RS00035Not AvailablePositive7070 - 799332759.9
heat shock protein transcriptional repressor hsprA1sIA105_RS00040Not AvailablePositive7990 - 838214491.7
duf1501 domain-containing proteinA1sIA105_RS00045Not AvailableNegative8379 - 961443262.9
duf1800 domain-containing proteinA1sIA105_RS00050Not AvailableNegative9624 - 1092248499.9

Displaying genes 1 – 10 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.