Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis isolate MMS-IA-105 chromosome,

Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaA1sIA105_RS03545Not AvailableNegative694255 - 69486321252.4
crossover junction endodeoxyribonuclease ruvcA1sIA105_RS03550Not AvailableNegative694860 - 69541419564.3
yebc/pmpr family dna-binding transcriptional regulatorA1sIA105_RS03555Not AvailableNegative695447 - 69619926562.2
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtA1sIA105_RS03560Not AvailableNegative696258 - 69683020734.0
pyridoxal 5'-phosphate synthase lyase subunit pdxsA1sIA105_RS03565Not AvailableNegative696844 - 69773131321.0
duf3048 domain-containing proteinA1sIA105_RS03570Not AvailableNegative697776 - 69881037258.4
hypothetical proteinA1sIA105_RS03575Not AvailableNegative698800 - 69930318789.8
glycosyltransferase family 4 proteinA1sIA105_RS03580Not AvailableNegative699296 - 70046841951.1
phosphatidylinositol mannoside acyltransferaseA1sIA105_RS03585Not AvailableNegative700474 - 70135833134.2
phosphatidylinositol phosphate synthaseA1sIA105_RS03590Not AvailableNegative701355 - 70195721278.4

Displaying genes 711 – 720 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.