Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis isolate MMS-IA-105 chromosome,

Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc-dependent metalloproteaseA1sIA105_RS00850Not AvailableNegative174197 - 17551047584.3
s16 family serine proteaseA1sIA105_RS00860Not AvailablePositive176089 - 17679624832.4
upf0182 family proteinA1sIA105_RS00865Not AvailablePositive176793 - 179597101422.0
Trna-metNot AvailableNot AvailablePositive179672 - 179748Not Available
heavy metal translocating p-type atpaseA1sIA105_RS00875Not AvailableNegative179774 - 18206579678.2
inositol monophosphatase family proteinA1sIA105_RS00880Not AvailableNegative182078 - 18288429110.3
ribosome small subunit-dependent gtpase aA1sIA105_RS00885Not AvailableNegative182894 - 18390436829.9
3-phosphoshikimate 1-carboxyvinyltransferaseA1sIA105_RS00890Not AvailableNegative183901 - 18517844983.3
sos response-associated peptidaseA1sIA105_RS00895Not AvailablePositive185250 - 18597226695.5
sigma-70 family rna polymerase sigma factorA1sIA105_RS00900Not AvailablePositive185988 - 18661423626.7

Displaying genes 171 – 180 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.