Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis isolate MMS-IA-105 chromosome,

Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-hydroxy acid oxidaseA1sIA105_RS06735Not AvailablePositive1289573 - 129080245893.6
4fe-4s dicluster domain-containing proteinA1sIA105_RS06740Not AvailablePositive1290820 - 129286575610.6
Tmrna,resume consensus sequence (at 546): aacaggtgcccaagataaNot AvailableNot AvailablePositive1293319 - 1294015Not Available
rhomboid family intramembrane serine proteaseA1sIA105_RS06745Not AvailableNegative1292840 - 129339719985.0
peptidylprolyl isomeraseA1sIA105_RS06750Not AvailableNegative1293410 - 129392218177.5
Trna-alaNot AvailableNot AvailablePositive1293924 - 1293996Not Available
Trna-pseudoNot AvailableNot AvailablePositive1294007 - 1294084Not Available
dna gyrase subunit aA1sIA105_RS06760Not AvailableNegative1294139 - 129663791949.4
dna topoisomerase (atp-hydrolyzing) subunit bA1sIA105_RS06765Not AvailableNegative1296637 - 129861673126.1
m48 family metallopeptidaseA1sIA105_RS06770Not AvailableNegative1298865 - 129978232485.6

Displaying genes 1351 – 1360 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.