Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis isolate MMS-IA-105 chromosome,

Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mandelate racemase/muconate lactonizing enzyme family proteinA1sIA105_RS06535Not AvailableNegative1251460 - 125258741309.2
sdr family nad(p)-dependent oxidoreductaseA1sIA105_RS06540Not AvailableNegative1252763 - 125354527102.9
smp-30/gluconolactonase/lre family proteinA1sIA105_RS06545Not AvailableNegative1253542 - 125442031309.1
sugar phosphate isomerase/epimerase family proteinA1sIA105_RS06550Not AvailableNegative1254552 - 125541833199.9
sdr family nad(p)-dependent oxidoreductaseA1sIA105_RS06555Not AvailableNegative1255415 - 125617626695.2
sdr family nad(p)-dependent oxidoreductaseA1sIA105_RS06560Not AvailablePositive1256313 - 125707426293.5
caib/baif coa transferase family proteinA1sIA105_RS06565Not AvailableNegative1257071 - 125819840238.2
alpha-ketoacid dehydrogenase subunit betaA1sIA105_RS06570Not AvailablePositive1258318 - 125935537301.3
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaA1sIA105_RS06575Not AvailablePositive1259352 - 126034735618.0
biotin/lipoyl-containing proteinA1sIA105_RS06580Not AvailablePositive1260347 - 12605868644.33

Displaying genes 1311 – 1320 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.