Candidatus Planktophila versatilis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila versatilis is characterized by having a single replicon, which denotes its genomic organization. The strain is cataloged under the accession number NZ_CP016775.1, providing a reference for its genetic sequence and biological attributes. This organism's classification as a member of the Planktophila genus suggests it plays a role in aquatic ecosystems, potentially contributing to the microbial community dynamics. While specific ecological roles are not detailed, the presence of a single replicon may indicate a streamlined genome, often associated with organisms that thrive in specific ecological niches. The genomic simplicity of Candidatus Planktophila versatilis may reflect adaptations that enhance its survival and functionality in its respective habitat. Understanding the genomic features of such microorganisms can provide insights into their evolutionary strategies and ecological interactions. Overall, the characteristics of Candidatus Planktophila versatilis highlight its potential importance in aquatic microbiomes, warranting further investigation into its ecological roles and interactions within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila versatilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila versatilis isolate MMS-IA-105 chromosome,

Gene Summary

Adenine Count

344880 bp

Thymine Count

342551 bp

Guanine Count

318564 bp

Cytosine Count

320596 bp

Genome Length

1326591 bp

Protein-coding Genes

1342 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
srpbcc family proteinA1sIA105_RS05040Not AvailableNegative976533 - 97698216653.2
tigr00730 family rossman fold proteinA1sIA105_RS05045Not AvailableNegative976983 - 97752219655.6
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseA1sIA105_RS05050Not AvailablePositive977553 - 97847031209.6
spoiid/lytb domain-containing proteinA1sIA105_RS05055Not AvailableNegative978481 - 97966541942.8
abc transporter atp-binding proteinA1sIA105_RS05060Not AvailableNegative979658 - 98046428990.9
abc transporter permeaseA1sIA105_RS05065Not AvailableNegative980442 - 98126931026.8
glycosyltransferase family 2 proteinA1sIA105_RS05070Not AvailableNegative981300 - 98230136421.6
lcp family proteinA1sIA105_RS05075Not AvailablePositive982338 - 98343839441.5
udp-glucose dehydrogenase family proteinA1sIA105_RS05080Not AvailablePositive983484 - 98479447117.6
5-(carboxyamino)imidazole ribonucleotide mutaseA1sIA105_RS05085Not AvailableNegative984791 - 98530617588.5

Displaying genes 1011 – 1020 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.