Mycobacterium sp. djl-10

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium sp. djl-10 is characterized by the presence of flagella, which is notable as many species within the Mycobacterium genus are typically non-motile. This trait suggests that Mycobacterium sp. djl-10 may exhibit a unique form of motility compared to its more commonly studied relatives. This organism possesses a total of four replicons, which indicates a complex genomic structure. The presence of multiple replicons can be associated with a variety of functions, including the regulation of gene expression and adaptability to different environments. The genomic data for Mycobacterium sp. djl-10 is available under the following accession numbers: NZ_CP016640.1, NZ_CP016641.1, NZ_CP016642.1, and NZ_CP016643.1. These accessions suggest a well-documented genomic framework, which can facilitate further studies into its biology and ecology. In terms of ecological insight, the presence of flagella may enable Mycobacterium sp. djl-10 to navigate through various environments, potentially allowing it to colonize niches that are less accessible to non-motile microorganisms. This motility could confer a competitive advantage in environments where movement towards nutrients or away from harmful substances is critical for survival. Understanding the implications of flagella in this species is essential for future research on its ecological role and potential applications in biotechnology or medicine.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium sp. djl-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sp. djl-10 plasmid djl-10_1, complete sequence.

Gene Summary

Adenine Count

23156 bp

Thymine Count

24852 bp

Guanine Count

45708 bp

Cytosine Count

40973 bp

Genome Length

134689 bp

Protein-coding Genes

129 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorBCA37_RS18170Not AvailableNegative3714216 - 371509131930.5
trap transporter small permeaseBCA37_RS18175Not AvailablePositive3715300 - 371592322542.9
trap transporter large permeaseBCA37_RS18180Q9HU16Positive3715956 - 371723944487.5
trap transporter substrate-binding proteinBCA37_RS18185Q312S0Positive3717269 - 371831837071.0
amp-binding proteinBCA37_RS18190Not AvailablePositive3718320 - 371989456249.4
duf2855 family proteinBCA37_RS18195Not AvailablePositive3719891 - 372096738345.9
hpch/hpai aldolase/citrate lyase family proteinBCA37_RS18200O86013Positive3720964 - 372174627105.0
tetr family transcriptional regulatorBCA37_RS18205Not AvailablePositive3721794 - 372265130660.5
heme-binding proteinBCA37_RS18210Not AvailableNegative3722626 - 372306014633.2
sdr family nad(p)-dependent oxidoreductaseBCA37_RS18215P71534Negative3723063 - 372381525929.8

Displaying genes 3851 – 3860 of 6391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001861(2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolC12H12O2Chemical structure of (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolNot available
Average188.226Da
Monoisotopic188.0837296Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00039463-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoateC9H11O4Chemical structure of 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoateNot available
Average183.1812Da
Monoisotopic183.0657338Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.