Hydrogenophaga sp. RAC07

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. RAC07 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure that may be advantageous for its metabolic processes. The genome of Hydrogenophaga sp. RAC07 is accessible under the accession number NZ_CP016449.1, which allows for further genomic analysis and study. As a member of the Hydrogenophaga genus, this bacterium is likely to exhibit metabolic capabilities associated with the utilization of hydrogen and other reduced compounds, potentially contributing to biogeochemical cycles within its habitat. Hydrogenophaga species are often found in environments rich in organic substrates, which may influence their ecological roles. The characterization of Hydrogenophaga sp. RAC07 adds to the understanding of the diversity within the Hydrogenophaga genus and highlights the importance of such microorganisms in ecological systems. Their potential for hydrogen utilization could have implications for bioremediation strategies and the cycling of nutrients in various ecosystems. Further research into this species may yield insights into its specific ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. RAC07
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. RAC07 chromosome, complete genome.

Gene Summary

Adenine Count

808109 bp

Thymine Count

804287 bp

Guanine Count

1531225 bp

Cytosine Count

1531063 bp

Genome Length

4674684 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bug family tripartite tricarboxylate transporter substrate binding proteinBSY239_RS06235Not AvailablePositive1336487 - 133744633098.9
tripartite tricarboxylate transporter tctb family proteinBSY239_RS06240Not AvailablePositive1337646 - 133817318140.3
tripartite tricarboxylate transporter permeaseBSY239_RS06245Not AvailablePositive1338196 - 133968652022.9
sigma-54 interaction domain-containing proteinBSY239_RS06250Not AvailablePositive1339911 - 134139253583.6
substrate-binding domain-containing proteinBSY239_RS06255Not AvailablePositive1341557 - 134276543584.9
abc transporter atp-binding proteinBSY239_RS06260Not AvailablePositive1342910 - 134367127193.8
abc transporter atp-binding proteinBSY239_RS06265Not AvailablePositive1343668 - 134440226317.1
branched-chain amino acid abc transporter permeaseBSY239_RS06270Not AvailablePositive1344399 - 134538834950.6
branched-chain amino acid abc transporter permeaseBSY239_RS06275Not AvailablePositive1345399 - 134649939644.9
alpha/beta fold hydrolaseBSY239_RS06280Not AvailablePositive1346496 - 134736231883.2

Displaying genes 1281 – 1290 of 4439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.