Bradyrhizobium icense strain LMTR 13

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium icense strain LMTR 13 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, which is an important feature for understanding its genomic organization and replication process. The strain is cataloged under the accession number NZ_CP016428.1, facilitating its identification and access to genomic information. As a member of the Bradyrhizobium genus, this strain is likely involved in symbiotic relationships with leguminous plants, aiding in nitrogen fixation. This ecological role is significant, as nitrogen-fixing bacteria contribute to soil fertility and can enhance agricultural productivity. The presence of flagella suggests that strain LMTR 13 may have an advantage in colonizing plant roots or navigating through the soil environment, which is vital for establishing symbiotic interactions. In summary, the traits of Bradyrhizobium icense strain LMTR 13, including its rod shape, flagella presence, and single replicon, underscore its potential ecological importance in nitrogen fixation and plant symbiosis. Understanding these characteristics may provide insights into its role in agricultural ecosystems and its contributions to sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium icense
Strainstrain LMTR 13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.

Gene Summary

Adenine Count

1579783 bp

Thymine Count

1580762 bp

Guanine Count

2582706 bp

Cytosine Count

2579522 bp

Genome Length

8322773 bp

Protein-coding Genes

7811 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr02281 family clan aa aspartic proteaseLMTR13_RS02470Not AvailablePositive515661 - 51616417744.4
phosphomannomutase/phosphoglucomutaseLMTR13_RS02475Not AvailablePositive516282 - 51778154674.8
lrp/asnc family transcriptional regulatorLMTR13_RS02480Not AvailableNegative517932 - 51843218347.4
sugar kinaseLMTR13_RS02485Not AvailableNegative518500 - 51946234321.1
nad(+) diphosphataseLMTR13_RS02490Not AvailableNegative519543 - 52049335088.3
hit domain-containing proteinLMTR13_RS02495Not AvailableNegative520498 - 52092315814.3
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive521151 - 521247Not Available
dna polymerase iii subunit gamma/tauLMTR13_RS02505Not AvailablePositive521357 - 52320166458.3
ybab/ebfc family nucleoid-associated proteinLMTR13_RS02510Not AvailablePositive523226 - 52354611331.0
recombination mediator recrLMTR13_RS02515Not AvailablePositive523548 - 52415321459.9

Displaying genes 531 – 540 of 7882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.