Bradyrhizobium icense strain LMTR 13

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium icense strain LMTR 13 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, which is an important feature for understanding its genomic organization and replication process. The strain is cataloged under the accession number NZ_CP016428.1, facilitating its identification and access to genomic information. As a member of the Bradyrhizobium genus, this strain is likely involved in symbiotic relationships with leguminous plants, aiding in nitrogen fixation. This ecological role is significant, as nitrogen-fixing bacteria contribute to soil fertility and can enhance agricultural productivity. The presence of flagella suggests that strain LMTR 13 may have an advantage in colonizing plant roots or navigating through the soil environment, which is vital for establishing symbiotic interactions. In summary, the traits of Bradyrhizobium icense strain LMTR 13, including its rod shape, flagella presence, and single replicon, underscore its potential ecological importance in nitrogen fixation and plant symbiosis. Understanding these characteristics may provide insights into its role in agricultural ecosystems and its contributions to sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium icense
Strainstrain LMTR 13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.

Gene Summary

Adenine Count

1579783 bp

Thymine Count

1580762 bp

Guanine Count

2582706 bp

Cytosine Count

2579522 bp

Genome Length

8322773 bp

Protein-coding Genes

7811 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-binding-like beta-propeller repeat proteinLMTR13_RS14940Not AvailableNegative3201943 - 320368262988.6
abc transporter substrate-binding proteinLMTR13_RS14945Not AvailableNegative3204091 - 320546749032.4
pas domain s-box proteinLMTR13_RS14950Not AvailablePositive3205691 - 320788381521.0
hypothetical proteinLMTR13_RS14955Not AvailablePositive3208956 - 32091506990.3
hypothetical proteinLMTR13_RS14960Not AvailablePositive3209250 - 32094416976.29
serine hydrolaseLMTR13_RS14965Not AvailablePositive3209806 - 321109545713.9
crp/fnr family transcriptional regulatorLMTR13_RS14970Not AvailablePositive3211255 - 321173417657.6
l,d-transpeptidaseLMTR13_RS14975Not AvailableNegative3211814 - 321243122391.2
vanadium-dependent haloperoxidaseLMTR13_RS14980Not AvailableNegative3212617 - 321384044422.2
hypothetical proteinLMTR13_RS14990Not AvailablePositive3214473 - 321479011483.1

Displaying genes 3071 – 3080 of 7882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.