Bradyrhizobium icense strain LMTR 13

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium icense strain LMTR 13 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, which is an important feature for understanding its genomic organization and replication process. The strain is cataloged under the accession number NZ_CP016428.1, facilitating its identification and access to genomic information. As a member of the Bradyrhizobium genus, this strain is likely involved in symbiotic relationships with leguminous plants, aiding in nitrogen fixation. This ecological role is significant, as nitrogen-fixing bacteria contribute to soil fertility and can enhance agricultural productivity. The presence of flagella suggests that strain LMTR 13 may have an advantage in colonizing plant roots or navigating through the soil environment, which is vital for establishing symbiotic interactions. In summary, the traits of Bradyrhizobium icense strain LMTR 13, including its rod shape, flagella presence, and single replicon, underscore its potential ecological importance in nitrogen fixation and plant symbiosis. Understanding these characteristics may provide insights into its role in agricultural ecosystems and its contributions to sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium icense
Strainstrain LMTR 13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.

Gene Summary

Adenine Count

1579783 bp

Thymine Count

1580762 bp

Guanine Count

2582706 bp

Cytosine Count

2579522 bp

Genome Length

8322773 bp

Protein-coding Genes

7811 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter permeaseLMTR13_RS12360Not AvailableNegative2617489 - 261838831769.4
amino acid abc transporter substrate-binding proteinLMTR13_RS12365Not AvailableNegative2618561 - 261977543540.9
cytochrome c family proteinLMTR13_RS12370Not AvailableNegative2621158 - 262176021862.8
ftsh protease activity modulator hflkLMTR13_RS12375Not AvailablePositive2622477 - 262359541618.6
giy-yig nuclease family proteinLMTR13_RS12380Not AvailablePositive2623592 - 262448433626.9
mechanosensitive ion channel family proteinLMTR13_RS12385Not AvailableNegative2624560 - 262581645908.4
duf502 domain-containing proteinLMTR13_RS12390Not AvailablePositive2626454 - 262712823827.2
pdz domain-containing proteinLMTR13_RS12395Not AvailableNegative2627574 - 26278409183.92
abc transporter substrate-binding proteinLMTR13_RS43315Not AvailableNegative2628482 - 262902720907.1
abc transporter substrate-binding proteinLMTR13_RS42420Not AvailableNegative2628955 - 262972528604.9

Displaying genes 2531 – 2540 of 7882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.