Bradyrhizobium icense strain LMTR 13

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium icense strain LMTR 13 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, which is an important feature for understanding its genomic organization and replication process. The strain is cataloged under the accession number NZ_CP016428.1, facilitating its identification and access to genomic information. As a member of the Bradyrhizobium genus, this strain is likely involved in symbiotic relationships with leguminous plants, aiding in nitrogen fixation. This ecological role is significant, as nitrogen-fixing bacteria contribute to soil fertility and can enhance agricultural productivity. The presence of flagella suggests that strain LMTR 13 may have an advantage in colonizing plant roots or navigating through the soil environment, which is vital for establishing symbiotic interactions. In summary, the traits of Bradyrhizobium icense strain LMTR 13, including its rod shape, flagella presence, and single replicon, underscore its potential ecological importance in nitrogen fixation and plant symbiosis. Understanding these characteristics may provide insights into its role in agricultural ecosystems and its contributions to sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium icense
Strainstrain LMTR 13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.

Gene Summary

Adenine Count

1579783 bp

Thymine Count

1580762 bp

Guanine Count

2582706 bp

Cytosine Count

2579522 bp

Genome Length

8322773 bp

Protein-coding Genes

7811 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family winged helix-turn-helix transcriptional regulatorLMTR13_RS06100Not AvailablePositive1273542 - 127414422345.8
tripartite tricarboxylate transporter substrate binding proteinLMTR13_RS06105Not AvailablePositive1274134 - 127510234708.1
methyltransferase dimerization domain-containing proteinLMTR13_RS38700Not AvailablePositive1275189 - 127551511208.5
methyltransferaseLMTR13_RS38705Not AvailablePositive1275512 - 127618924370.4
duf1236 domain-containing proteinLMTR13_RS06115Not AvailablePositive1276330 - 127753542932.8
endonuclease/exonuclease/phosphatase family proteinLMTR13_RS06120Not AvailablePositive1277844 - 127895641011.9
gamma-glutamyltransferase family proteinLMTR13_RS06125Not AvailableNegative1279034 - 128062656085.6
gamma-glutamylcyclotransferaseLMTR13_RS06130Not AvailablePositive1280737 - 128155830067.1
nad(p)/fad-dependent oxidoreductaseLMTR13_RS06135Not AvailablePositive1281725 - 128338962367.7
phytanoyl-coa dioxygenase family proteinLMTR13_RS06140Not AvailableNegative1283560 - 128441131301.4

Displaying genes 1271 – 1280 of 7882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.