Bradyrhizobium icense strain LMTR 13

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium icense strain LMTR 13 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, which is an important feature for understanding its genomic organization and replication process. The strain is cataloged under the accession number NZ_CP016428.1, facilitating its identification and access to genomic information. As a member of the Bradyrhizobium genus, this strain is likely involved in symbiotic relationships with leguminous plants, aiding in nitrogen fixation. This ecological role is significant, as nitrogen-fixing bacteria contribute to soil fertility and can enhance agricultural productivity. The presence of flagella suggests that strain LMTR 13 may have an advantage in colonizing plant roots or navigating through the soil environment, which is vital for establishing symbiotic interactions. In summary, the traits of Bradyrhizobium icense strain LMTR 13, including its rod shape, flagella presence, and single replicon, underscore its potential ecological importance in nitrogen fixation and plant symbiosis. Understanding these characteristics may provide insights into its role in agricultural ecosystems and its contributions to sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium icense
Strainstrain LMTR 13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.

Gene Summary

Adenine Count

1579783 bp

Thymine Count

1580762 bp

Guanine Count

2582706 bp

Cytosine Count

2579522 bp

Genome Length

8322773 bp

Protein-coding Genes

7811 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinLMTR13_RS05255Not AvailableNegative1096605 - 109688010256.5
giy-yig nuclease family proteinLMTR13_RS38675Not AvailablePositive1097147 - 109756514910.9
glxa family transcriptional regulatorLMTR13_RS05265Not AvailableNegative1097596 - 109852533730.2
dienelactone hydrolase family proteinLMTR13_RS05270Not AvailablePositive1098678 - 109951730148.3
marr family winged helix-turn-helix transcriptional regulatorLMTR13_RS05275Not AvailableNegative1099558 - 110008519746.0
sdr family nad(p)-dependent oxidoreductaseLMTR13_RS05280Not AvailableNegative1100105 - 110083925393.4
aromatic-ring-hydroxylating dioxygenase subunit betaLMTR13_RS05285Not AvailableNegative1100846 - 110135819960.9
aromatic ring-hydroxylating dioxygenase subunit alphaLMTR13_RS05290Not AvailableNegative1101360 - 110267349474.9
pdr/vanb family oxidoreductaseLMTR13_RS05295Not AvailableNegative1102685 - 110364734663.7
indolepyruvate oxidoreductase subunit beta family proteinLMTR13_RS05300Not AvailableNegative1103650 - 110519455560.1

Displaying genes 1101 – 1110 of 7882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.