Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigz | VSVS05_RS19230 | Not Available | Negative | 1091985 - 1092557 | 21791.7 |
| helix-turn-helix transcriptional regulator | VSVS05_RS19235 | Not Available | Negative | 1092541 - 1092837 | 10522.7 |
| hypothetical protein | VSVS05_RS19240 | Not Available | Negative | 1093213 - 1093692 | 18542.7 |
| giy-yig nuclease family protein | VSVS05_RS19245 | Not Available | Negative | 1093655 - 1094593 | 36705.6 |
| hypothetical protein | VSVS05_RS19250 | Not Available | Negative | 1094577 - 1094885 | 11590.8 |
| duf5062 family protein | VSVS05_RS19255 | Not Available | Negative | 1095197 - 1095457 | 9672.06 |
| n-acetyltransferase | VSVS05_RS19260 | Not Available | Negative | 1095527 - 1096006 | 18183.7 |
| permease | VSVS05_RS19265 | Not Available | Positive | 1096458 - 1097531 | 38242.5 |
| laci family dna-binding transcriptional regulator | VSVS05_RS19270 | Not Available | Positive | 1097890 - 1098909 | 37468.5 |
| trap transporter substrate-binding protein | VSVS05_RS19275 | Not Available | Positive | 1099064 - 1100053 | 36487.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



