Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630 family transposase | VSVS05_RS18935 | Not Available | Positive | 1028759 - 1029790 | 38968.5 |
| glutamate decarboxylase | VSVS05_RS18940 | Not Available | Negative | 1029895 - 1031289 | 52571.3 |
| glutaminase a | VSVS05_RS18945 | Not Available | Negative | 1031305 - 1032264 | 33959.3 |
| putative glutamine/gamma-aminobutyrate antiporter gadc | VSVS05_RS18950 | Not Available | Negative | 1032279 - 1033799 | 55018.2 |
| dead/deah box helicase | VSVS05_RS18955 | Not Available | Negative | 1034661 - 1036226 | 55893.7 |
| nupc/nupg family nucleoside cnt transporter | VSVS05_RS18960 | Not Available | Positive | 1036835 - 1038043 | 41995.3 |
| lysr family transcriptional regulator | VSVS05_RS18965 | Not Available | Negative | 1038176 - 1039078 | 33494.4 |
| nadph-dependent fmn reductase | VSVS05_RS18970 | Not Available | Positive | 1039214 - 1039735 | 18930.3 |
| arginine decarboxylase | VSVS05_RS18975 | Not Available | Negative | 1039913 - 1042204 | 86047.1 |
| putrescine-ornithine antiporter | VSVS05_RS18980 | Not Available | Negative | 1042268 - 1043584 | 46464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



