Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VSVS05_RS18835 | Not Available | Positive | 1007348 - 1008133 | 29232.6 |
| abc transporter atp-binding protein | VSVS05_RS18840 | Not Available | Positive | 1008133 - 1009152 | 38226.1 |
| had family phosphatase | VSVS05_RS18845 | Not Available | Positive | 1009155 - 1009817 | 25165.1 |
| cytochrome b/b6 domain-containing protein | VSVS05_RS18850 | Not Available | Positive | 1010063 - 1010626 | 20679.8 |
| plp-dependent aminotransferase family protein | VSVS05_RS18855 | Not Available | Negative | 1010696 - 1011847 | 42448.3 |
| gyri-like domain-containing protein | VSVS05_RS18860 | Not Available | Positive | 1012045 - 1012914 | 33348.9 |
| hypothetical protein | VSVS05_RS18865 | Not Available | Positive | 1013097 - 1013846 | 27339.3 |
| is4 family transposase | VSVS05_RS18870 | Not Available | Negative | 1013855 - 1015063 | 45975.1 |
| tonb-dependent siderophore receptor | VSVS05_RS18875 | Not Available | Positive | 1015269 - 1016570 | 50361.8 |
| yfir family protein | VSVS05_RS18880 | Not Available | Positive | 1016584 - 1017117 | 19837.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



