Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiw/ydei family stress tolerance ob fold protein | VSVS05_RS17245 | Not Available | Positive | 619516 - 619854 | 12186.4 |
| response regulator transcription factor | VSVS05_RS17250 | Not Available | Positive | 620030 - 620788 | 28604.4 |
| sensor histidine kinase | VSVS05_RS17255 | Not Available | Positive | 620785 - 622119 | 50649.0 |
| tonb-dependent receptor domain-containing protein | VSVS05_RS17260 | Not Available | Positive | 622358 - 624274 | 70568.3 |
| siderophore abc transporter substrate-binding protein | VSVS05_RS17265 | Not Available | Positive | 624288 - 625193 | 33305.9 |
| mfs transporter | VSVS05_RS22480 | Not Available | Positive | 625407 - 626123 | 26054.2 |
| mfs transporter | VSVS05_RS22485 | Not Available | Positive | 626038 - 626607 | 20465.7 |
| fatty acid cis/trans isomerase | VSVS05_RS17275 | Not Available | Positive | 626732 - 629089 | 90448.8 |
| hypothetical protein | VSVS05_RS17280 | Not Available | Positive | 629128 - 629313 | 7162.13 |
| sigma-54 dependent transcriptional regulator | VSVS05_RS17285 | Not Available | Negative | 629367 - 630629 | 47895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



