Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quorum-sensing autoinducer 2 sensor kinase/phosphatase luxq | VSVS05_RS16705 | Not Available | Negative | 488899 - 491466 | 97137.1 |
| autoinducer 2-binding periplasmic protein luxp | VSVS05_RS16710 | Not Available | Negative | 491466 - 492563 | 41160.3 |
| giy-yig nuclease family protein | VSVS05_RS16715 | Not Available | Negative | 492679 - 493002 | 12031.7 |
| yceh family protein | VSVS05_RS16720 | Not Available | Negative | 492995 - 493651 | 23973.5 |
| hypothetical protein | VSVS05_RS16725 | Not Available | Negative | 493685 - 493879 | 7363.83 |
| duf496 family protein | VSVS05_RS16730 | Not Available | Positive | 494070 - 494390 | 12567.2 |
| ygjv family protein | VSVS05_RS16735 | Not Available | Positive | 494796 - 495032 | 8790.08 |
| glycerol kinase glpk | VSVS05_RS16740 | Not Available | Negative | 495158 - 496663 | 54576.6 |
| ompa family protein | VSVS05_RS16745 | Not Available | Negative | 496774 - 497367 | 21447.3 |
| thiol:disulfide interchange protein dsba/dsbl | VSVS05_RS16750 | Not Available | Positive | 497653 - 498270 | 22501.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



