Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | VSVS05_RS13575 | Not Available | Positive | 2979492 - 2981558 | 75783.8 |
| valine--pyruvate transaminase | VSVS05_RS13580 | Not Available | Positive | 2981765 - 2983012 | 46161.4 |
| hsp20 family protein | VSVS05_RS13585 | Not Available | Negative | 2983126 - 2983563 | 16546.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | VSVS05_RS13590 | Not Available | Negative | 2984099 - 2986519 | 89761.7 |
| eal and hdod domain-containing protein | VSVS05_RS13595 | Not Available | Negative | 2986537 - 2987617 | 37333.0 |
| dna polymerase iii subunit beta | VSVS05_RS13600 | Not Available | Negative | 2987619 - 2988719 | 40623.6 |
| chromosomal replication initiator protein dnaa | VSVS05_RS13605 | Not Available | Negative | 2988806 - 2990212 | 53121.4 |
| amino acid abc transporter substrate-binding protein | VSVS05_RS13610 | Not Available | Positive | 2990637 - 2991395 | 27577.7 |
| amino acid abc transporter permease | VSVS05_RS13615 | Not Available | Positive | 2991481 - 2992152 | 25004.6 |
| amino acid abc transporter atp-binding protein | VSVS05_RS13620 | Not Available | Positive | 2992149 - 2992886 | 27141.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



