Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | VSVS05_RS13430 | Not Available | Positive | 2946372 - 2947514 | 41250.3 |
| type i dna topoisomerase | VSVS05_RS13435 | Not Available | Negative | 2947569 - 2948147 | 21765.2 |
| duf494 family protein | VSVS05_RS13440 | Not Available | Negative | 2948269 - 2948745 | 18370.0 |
| dna-processing protein dpra | VSVS05_RS13445 | Not Available | Negative | 2948742 - 2949881 | 41162.2 |
| peptidoglycan-binding protein lysm | VSVS05_RS13450 | Not Available | Negative | 2949885 - 2950820 | 34644.5 |
| peptide deformylase | VSVS05_RS13455 | Not Available | Positive | 2950991 - 2951500 | 19035.0 |
| methionyl-trna formyltransferase | VSVS05_RS13460 | Not Available | Positive | 2951519 - 2952466 | 34012.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | VSVS05_RS13465 | Not Available | Positive | 2952605 - 2953885 | 47683.9 |
| trk system potassium transporter trka | VSVS05_RS13470 | Not Available | Positive | 2954046 - 2955422 | 50219.3 |
| trkh family potassium uptake protein | VSVS05_RS13475 | Not Available | Positive | 2955436 - 2956881 | 52244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



