Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | VSVS05_RS11985 | Not Available | Positive | 2648325 - 2648822 | 18148.3 |
| lps export abc transporter atp-binding protein | VSVS05_RS11990 | Not Available | Positive | 2648825 - 2649550 | 26864.5 |
| rna polymerase factor sigma-54 | VSVS05_RS11995 | Not Available | Positive | 2649594 - 2651054 | 54837.7 |
| ribosome hibernation promoting factor | VSVS05_RS12000 | Not Available | Positive | 2651079 - 2651366 | 11034.1 |
| pts iia-like nitrogen regulatory protein ptsn | VSVS05_RS12005 | Not Available | Positive | 2651369 - 2651815 | 16525.1 |
| rnase adapter rapz | VSVS05_RS12010 | Not Available | Positive | 2651824 - 2652687 | 32786.2 |
| hpr family phosphocarrier protein | VSVS05_RS12015 | Not Available | Positive | 2652691 - 2652969 | 9976.89 |
| magnesium transporter | VSVS05_RS12020 | Not Available | Positive | 2653108 - 2654463 | 49112.1 |
| methionine synthase | VSVS05_RS12025 | Not Available | Negative | 2654546 - 2658223 | 136297.0 |
| sodium:proton antiporter | VSVS05_RS12030 | Not Available | Positive | 2658393 - 2659676 | 47045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



