Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3389 domain-containing protein | VSVS05_RS16465 | Not Available | Positive | 433512 - 433745 | 8275.05 |
| sgrr family transcriptional regulator | VSVS05_RS16470 | Not Available | Positive | 433815 - 435539 | 66094.0 |
| hypothetical protein | VSVS05_RS16475 | Not Available | Positive | 435523 - 435774 | 9448.93 |
| lysr family transcriptional regulator | VSVS05_RS16480 | Not Available | Positive | 436289 - 437176 | 32809.7 |
| bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferase | VSVS05_RS16485 | Not Available | Negative | 437325 - 440021 | 98950.6 |
| spor domain-containing protein | VSVS05_RS16490 | Not Available | Positive | 440238 - 440765 | 19239.8 |
| d-alanine--d-alanine ligase | VSVS05_RS16495 | Not Available | Positive | 440919 - 441911 | 36809.4 |
| tyrosine-type recombinase/integrase | VSVS05_RS16500 | Not Available | Negative | 441938 - 442894 | 36371.8 |
| duf3319 domain-containing protein | VSVS05_RS16505 | Not Available | Positive | 442993 - 443367 | 14004.9 |
| stress response translation initiation inhibitor ycih | VSVS05_RS16510 | Not Available | Positive | 443370 - 443681 | 11067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



