Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1097 domain-containing protein | VSVS05_RS16415 | Not Available | Positive | 422322 - 422810 | 17232.3 |
| atp-dependent endonuclease | VSVS05_RS16420 | Not Available | Negative | 422917 - 424548 | 62244.2 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | VSVS05_RS16425 | Not Available | Positive | 424704 - 426434 | 63910.8 |
| terc/alx family metal homeostasis membrane protein | VSVS05_RS16430 | Not Available | Positive | 426885 - 427832 | 35004.9 |
| hypothetical protein | VSVS05_RS16435 | Not Available | Positive | 428131 - 428322 | 7246.69 |
| pas domain-containing methyl-accepting chemotaxis protein | VSVS05_RS16440 | Not Available | Positive | 428531 - 430081 | 56806.2 |
| phna domain-containing protein | VSVS05_RS16445 | Not Available | Negative | 430152 - 430709 | 20576.7 |
| site-2 protease family protein | VSVS05_RS16450 | Not Available | Positive | 430974 - 432056 | 40194.9 |
| m48 family metallopeptidase | VSVS05_RS16455 | Not Available | Negative | 432175 - 432960 | 28290.5 |
| hotdog fold thioesterase | VSVS05_RS16460 | Not Available | Positive | 433042 - 433500 | 16523.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



