Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajg family lipoprotein | VSVS05_RS10630 | Not Available | Positive | 2346390 - 2346962 | 20999.1 |
| peptidylprolyl isomerase | VSVS05_RS10635 | Not Available | Positive | 2346962 - 2347507 | 19753.5 |
| ampg family muropeptide mfs transporter | VSVS05_RS10640 | Not Available | Positive | 2347593 - 2348969 | 50692.5 |
| chrr family anti-sigma-e factor | VSVS05_RS10645 | Not Available | Negative | 2349030 - 2349692 | 24793.6 |
| sigma-70 family rna polymerase sigma factor | VSVS05_RS10650 | Not Available | Negative | 2349689 - 2350273 | 22557.2 |
| lon peptidase substrate-binding domain-containing protein | VSVS05_RS10655 | Not Available | Negative | 2350330 - 2350902 | 22134.6 |
| outer membrane protein ompk | VSVS05_RS10660 | Not Available | Positive | 2351251 - 2352093 | 31691.8 |
| 2-dehydropantoate 2-reductase | VSVS05_RS10665 | Not Available | Positive | 2352197 - 2353078 | 32468.6 |
| dj-1 family glyoxalase iii | VSVS05_RS10670 | Not Available | Positive | 2353083 - 2353682 | 21606.3 |
| cysteine desulfurase csda | VSVS05_RS10675 | Not Available | Positive | 2353682 - 2354893 | 43869.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



