Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein | VSVS05_RS08725 | Not Available | Positive | 1958210 - 1958785 | 20956.6 |
| trna dihydrouridine(16) synthase dusc | VSVS05_RS08730 | Not Available | Positive | 1958876 - 1959826 | 35503.7 |
| abc transporter atp-binding protein | VSVS05_RS08735 | Not Available | Negative | 1959952 - 1960746 | 28884.2 |
| abc transporter permease | VSVS05_RS08740 | Not Available | Negative | 1960743 - 1961678 | 32101.9 |
| abc transporter substrate-binding protein | VSVS05_RS08745 | Not Available | Negative | 1961780 - 1962745 | 33147.8 |
| methyltransferase | VSVS05_RS08750 | Not Available | Negative | 1962976 - 1964169 | 45279.0 |
| hth-type transcriptional regulator cysb | VSVS05_RS08755 | Not Available | Negative | 1964238 - 1965212 | 35925.4 |
| hypothetical protein | VSVS05_RS08760 | Not Available | Positive | 1965564 - 1966328 | 28982.1 |
| orotidine-5'-phosphate decarboxylase | VSVS05_RS08765 | Not Available | Negative | 1966482 - 1967177 | 25044.4 |
| lipopolysaccharide assembly protein lapb | VSVS05_RS08770 | Not Available | Negative | 1967263 - 1968432 | 44512.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



