Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeah/yhbh family protein | VSVS05_RS07940 | Not Available | Positive | 1764331 - 1765602 | 48743.7 |
| spovr family protein | VSVS05_RS07945 | Not Available | Positive | 1765612 - 1767150 | 60248.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | VSVS05_RS07950 | Not Available | Negative | 1767212 - 1767961 | 27378.5 |
| trm112 family protein | VSVS05_RS07955 | Not Available | Negative | 1767961 - 1768140 | 6780.39 |
| tetraacyldisaccharide 4'-kinase | VSVS05_RS07960 | Not Available | Negative | 1768121 - 1769128 | 37090.7 |
| lipid a abc transporter atp-binding protein/permease msba | VSVS05_RS07965 | Not Available | Negative | 1769132 - 1770883 | 64326.6 |
| dna internalization-related competence protein comec/rec2 | VSVS05_RS22425 | Not Available | Negative | 1770916 - 1771929 | 38461.6 |
| comec/rec2 family competence protein | VSVS05_RS22430 | Not Available | Negative | 1771952 - 1773229 | 47392.9 |
| duf2062 domain-containing protein | VSVS05_RS07975 | Not Available | Positive | 1773238 - 1773765 | 20011.4 |
| lipoprotein-releasing abc transporter permease subunit lole | VSVS05_RS07980 | Not Available | Negative | 1773959 - 1775203 | 44884.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



