Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VSVS05_RS07890 | Not Available | Negative | 1750517 - 1751284 | 28067.5 |
| abc transporter atp-binding protein | VSVS05_RS07895 | Not Available | Negative | 1751438 - 1752208 | 28324.2 |
| duf3360 family protein | VSVS05_RS07900 | Not Available | Positive | 1752863 - 1754410 | 55239.7 |
| formate c-acetyltransferase | VSVS05_RS07905 | Not Available | Positive | 1754712 - 1756988 | 84360.3 |
| lipid a deacylase lpxr family protein | VSVS05_RS07910 | Not Available | Positive | 1757248 - 1758243 | 36445.4 |
| pyruvate formate lyase 1-activating protein | VSVS05_RS07915 | Not Available | Positive | 1758449 - 1759189 | 28146.5 |
| eal and hdod domain-containing protein | VSVS05_RS07920 | Not Available | Negative | 1759263 - 1760352 | 37707.6 |
| yfbu family protein | VSVS05_RS07925 | Not Available | Positive | 1760650 - 1761150 | 20098.3 |
| mipa/ompv family protein | VSVS05_RS07930 | Not Available | Negative | 1761213 - 1761941 | 26297.3 |
| prka family serine protein kinase | VSVS05_RS07935 | Not Available | Positive | 1762301 - 1764235 | 74019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



