Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease subunit | VSVS05_RS07295 | Not Available | Negative | 1615355 - 1615888 | 20299.3 |
| trap transporter substrate-binding protein | VSVS05_RS07300 | Not Available | Negative | 1616075 - 1617196 | 41667.5 |
| hypothetical protein | VSVS05_RS07305 | Not Available | Negative | 1617573 - 1617959 | 13600.8 |
| duf2982 domain-containing protein | VSVS05_RS07310 | Not Available | Positive | 1618193 - 1618933 | 28681.7 |
| mbl fold metallo-hydrolase | VSVS05_RS07315 | Not Available | Negative | 1619049 - 1619705 | 23837.4 |
| ycbk family protein | VSVS05_RS07320 | Not Available | Negative | 1619791 - 1620333 | 20061.9 |
| murein l,d-transpeptidase | VSVS05_RS07325 | Not Available | Negative | 1620543 - 1622081 | 59430.9 |
| duf1513 domain-containing protein | VSVS05_RS07330 | Not Available | Negative | 1622193 - 1623278 | 39524.1 |
| imelysin family protein | VSVS05_RS07335 | Not Available | Negative | 1623268 - 1624293 | 37921.7 |
| di-heme oxidoredictase family protein | VSVS05_RS07340 | Not Available | Negative | 1624317 - 1625711 | 51012.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



