Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | VSVS05_RS07245 | Not Available | Negative | 1606316 - 1606792 | 18349.9 |
| dopa 4,5-dioxygenase family protein | VSVS05_RS07250 | Not Available | Negative | 1606979 - 1607326 | 13663.7 |
| laci family dna-binding transcriptional regulator | VSVS05_RS07255 | Not Available | Positive | 1607523 - 1608521 | 35807.1 |
| pts sugar transporter subunit iib | VSVS05_RS07260 | Not Available | Positive | 1608803 - 1609111 | 11214.6 |
| pts cellobiose transporter subunit iic | VSVS05_RS07265 | Not Available | Positive | 1609132 - 1610472 | 47736.3 |
| pts lactose/cellobiose transporter subunit iia | VSVS05_RS07270 | Not Available | Positive | 1610456 - 1610902 | 16382.3 |
| dihydrodipicolinate synthase | VSVS05_RS07275 | Not Available | Positive | 1610899 - 1611780 | 31732.7 |
| response regulator transcription factor | VSVS05_RS07280 | Not Available | Negative | 1611949 - 1612584 | 23445.7 |
| cache domain-containing protein | VSVS05_RS07285 | Not Available | Negative | 1612577 - 1613932 | 50943.6 |
| trap transporter large permease subunit | VSVS05_RS07290 | Not Available | Negative | 1614061 - 1615344 | 45781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



