Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | VSVS05_RS07135 | Not Available | Negative | 1584191 - 1585669 | 52393.4 |
| glutathione s-transferase | VSVS05_RS07140 | Not Available | Positive | 1586164 - 1586829 | 26072.8 |
| hypothetical protein | VSVS05_RS07145 | Not Available | Negative | 1586908 - 1587870 | 37421.2 |
| is4 family transposase | VSVS05_RS07150 | Not Available | Negative | 1588086 - 1589417 | 51556.0 |
| duf2913 family protein | VSVS05_RS07155 | Not Available | Negative | 1589552 - 1590217 | 25179.9 |
| bcr/cfla family multidrug efflux mfs transporter | VSVS05_RS07160 | Not Available | Negative | 1590217 - 1591419 | 42530.3 |
| 16s rrna pseudouridine(516) synthase rsua | VSVS05_RS07165 | Not Available | Negative | 1591631 - 1592362 | 27584.1 |
| dead/deah box helicase | VSVS05_RS07170 | Not Available | Positive | 1592436 - 1594178 | 65962.1 |
| pepsy domain-containing protein | VSVS05_RS07175 | Not Available | Positive | 1594281 - 1594712 | 16441.4 |
| response regulator transcription factor | VSVS05_RS07180 | Not Available | Positive | 1594717 - 1595376 | 24513.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



