Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cache domain-containing protein | VSVS05_RS06880 | Not Available | Positive | 1516196 - 1518682 | 94158.6 |
| flippase | VSVS05_RS06885 | Not Available | Positive | 1518937 - 1520241 | 48099.4 |
| ggdef domain-containing protein | VSVS05_RS06890 | Not Available | Positive | 1520394 - 1521434 | 39328.9 |
| duf2726 domain-containing protein | VSVS05_RS06895 | Not Available | Negative | 1521482 - 1522138 | 24598.0 |
| amino acid abc transporter atp-binding protein | VSVS05_RS06900 | Not Available | Positive | 1522383 - 1523114 | 27271.3 |
| amino acid abc transporter permease | VSVS05_RS06905 | Not Available | Positive | 1523115 - 1523912 | 29307.3 |
| transporter substrate-binding domain-containing protein | VSVS05_RS06910 | Not Available | Positive | 1523922 - 1524749 | 30713.4 |
| eal and hdod domain-containing protein | VSVS05_RS06915 | Not Available | Positive | 1524877 - 1525756 | 33038.1 |
| tetratricopeptide repeat protein | VSVS05_RS06920 | Not Available | Negative | 1525845 - 1527044 | 45346.5 |
| energy transducer tonb | VSVS05_RS06925 | Not Available | Negative | 1527041 - 1527661 | 22945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



