Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | VSVS05_RS06335 | Not Available | Positive | 1389106 - 1389342 | 9005.6 |
| abc transporter atp-binding protein | VSVS05_RS06340 | Not Available | Positive | 1389320 - 1391236 | 72186.0 |
| duf3466 family protein | VSVS05_RS06345 | Not Available | Positive | 1391244 - 1392884 | 58507.6 |
| ribosome modulation factor | VSVS05_RS06350 | Not Available | Positive | 1393052 - 1393225 | 6758.94 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | VSVS05_RS06355 | Not Available | Negative | 1393356 - 1393874 | 19052.3 |
| lon protease family protein | VSVS05_RS06360 | Not Available | Negative | 1393945 - 1395588 | 60995.7 |
| macrodomain ter protein matp | VSVS05_RS06365 | Not Available | Positive | 1395774 - 1396223 | 17605.0 |
| duf3634 family protein | VSVS05_RS06370 | Not Available | Positive | 1396237 - 1396545 | 11687.5 |
| hypothetical protein | VSVS05_RS06375 | Not Available | Negative | 1397692 - 1398048 | 13576.3 |
| cytochrome-c oxidase, cbb3-type subunit i | VSVS05_RS06380 | Not Available | Positive | 1398309 - 1399736 | 53383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



