Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | VSVS05_RS05890 | Not Available | Positive | 1278555 - 1279178 | 22906.4 |
| histidine ammonia-lyase | VSVS05_RS05895 | Not Available | Negative | 1279253 - 1280785 | 54780.8 |
| urocanate hydratase | VSVS05_RS05900 | Not Available | Negative | 1280788 - 1282482 | 61890.8 |
| formimidoylglutamase | VSVS05_RS05905 | Not Available | Negative | 1282503 - 1283501 | 36913.8 |
| imidazolonepropionase | VSVS05_RS05910 | Not Available | Negative | 1283494 - 1284765 | 46101.4 |
| histidine utilization repressor | VSVS05_RS05915 | Not Available | Negative | 1284868 - 1285581 | 27116.6 |
| sporulation protein | VSVS05_RS05920 | Not Available | Positive | 1285830 - 1286573 | 27172.5 |
| duf3187 family protein | VSVS05_RS05925 | Not Available | Negative | 1286584 - 1287558 | 37597.5 |
| rela/spot domain-containing protein | VSVS05_RS05930 | Not Available | Negative | 1287692 - 1288468 | 28930.5 |
| thiopurine s-methyltransferase | VSVS05_RS05935 | Not Available | Positive | 1288800 - 1289447 | 24657.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



