Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | VSVS05_RS04520 | Not Available | Positive | 958675 - 959343 | 25345.1 |
| envelope stress response membrane protein pspb | VSVS05_RS04525 | Not Available | Positive | 959428 - 959661 | 9291.28 |
| envelope stress response membrane protein pspc | VSVS05_RS04530 | Not Available | Positive | 959624 - 960040 | 15582.9 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS05_RS04535 | Not Available | Positive | 960240 - 961271 | 37524.9 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS05_RS04540 | Not Available | Positive | 961273 - 962358 | 39639.4 |
| efflux rnd transporter permease subunit | VSVS05_RS04545 | Not Available | Positive | 962351 - 965449 | 114159.0 |
| dna-3-methyladenine glycosylase i | VSVS05_RS04550 | Not Available | Positive | 965501 - 966076 | 21997.1 |
| cystathionine beta-lyase | VSVS05_RS04555 | Not Available | Negative | 966188 - 967393 | 44537.1 |
| cardiolipin synthase | VSVS05_RS04560 | Not Available | Negative | 967540 - 968994 | 55247.1 |
| sodium-dependent transporter | VSVS05_RS04565 | Not Available | Positive | 969384 - 970727 | 47819.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



