Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope integrity protein tola | VSVS05_RS04125 | Not Available | Positive | 872083 - 873168 | 41268.6 |
| tol-pal system beta propeller repeat protein tolb | VSVS05_RS04130 | Not Available | Positive | 873184 - 874536 | 49802.5 |
| peptidoglycan-associated lipoprotein pal | VSVS05_RS04135 | Not Available | Positive | 874571 - 875086 | 18272.5 |
| tol-pal system protein ybgf | VSVS05_RS04140 | Not Available | Positive | 875102 - 875875 | 28910.9 |
| quinolinate synthase nada | VSVS05_RS04145 | Not Available | Positive | 876006 - 877067 | 38567.4 |
| potassium channel family protein | VSVS05_RS04150 | Not Available | Positive | 877310 - 878341 | 38125.9 |
| upf0149 family protein | VSVS05_RS04155 | Not Available | Negative | 878462 - 879034 | 21385.2 |
| hybrid sensor histidine kinase/response regulator | VSVS05_RS04160 | Not Available | Positive | 879163 - 881583 | 89653.0 |
| l-alanine exporter alae | VSVS05_RS04165 | Not Available | Positive | 881825 - 882274 | 16454.3 |
| Trna-ser | Not Available | Not Available | Positive | 882424 - 882511 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



