Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | VSVS05_RS03830 | Not Available | Positive | 806447 - 807829 | 52097.4 |
| thymidine kinase | VSVS05_RS03835 | Not Available | Positive | 807931 - 808509 | 21786.1 |
| translation initiation factor if-1 | VSVS05_RS03840 | Not Available | Negative | 808579 - 808797 | 8205.1 |
| arginyltransferase | VSVS05_RS03845 | Not Available | Negative | 808879 - 809577 | 26937.9 |
| leucyl/phenylalanyl-trna--protein transferase | VSVS05_RS03850 | Not Available | Negative | 809579 - 810295 | 27333.3 |
| glycine zipper 2tm domain-containing protein | VSVS05_RS03855 | Not Available | Positive | 810314 - 810769 | 16782.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | VSVS05_RS03860 | Not Available | Positive | 810923 - 812218 | 46032.9 |
| ycin family protein | VSVS05_RS03865 | Not Available | Negative | 812496 - 812744 | 9457.23 |
| type i dna topoisomerase | VSVS05_RS03870 | Not Available | Positive | 813161 - 815782 | 97776.7 |
| glucose-1-phosphate adenylyltransferase | VSVS05_RS03875 | Not Available | Positive | 816223 - 817440 | 45418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



