Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmi | VSVS05_RS03635 | Not Available | Positive | 764914 - 766134 | 45105.0 |
| vacj family lipoprotein | VSVS05_RS03640 | Not Available | Positive | 766197 - 766958 | 28130.0 |
| outer membrane protein transport protein | VSVS05_RS03645 | Not Available | Negative | 767052 - 768368 | 47164.9 |
| outer membrane protein transport protein | VSVS05_RS03650 | Not Available | Negative | 768712 - 770010 | 46842.2 |
| is630 family transposase | VSVS05_RS03655 | Not Available | Positive | 770155 - 771186 | 38968.5 |
| duf3379 domain-containing protein | VSVS05_RS03660 | Not Available | Negative | 771395 - 772126 | 26773.0 |
| sigma-70 family rna polymerase sigma factor | VSVS05_RS03665 | Not Available | Negative | 772119 - 772694 | 22445.7 |
| acetyl-coa c-acyltransferase fadi | VSVS05_RS03670 | Not Available | Positive | 773256 - 774563 | 46240.0 |
| fatty acid oxidation complex subunit alpha fadj | VSVS05_RS03675 | Not Available | Positive | 774563 - 776677 | 76934.7 |
| nad(p)h nitroreductase | VSVS05_RS03680 | Not Available | Positive | 776825 - 777373 | 19705.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



