Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3301 domain-containing protein | VSVS05_RS03020 | Not Available | Negative | 634810 - 635109 | 11693.5 |
| duf3549 family protein | VSVS05_RS03025 | Not Available | Negative | 635124 - 636161 | 38997.1 |
| yqcc family protein | VSVS05_RS03030 | Not Available | Positive | 636238 - 636552 | 11972.5 |
| trna pseudouridine(65) synthase truc | VSVS05_RS03035 | Not Available | Positive | 636553 - 637275 | 27789.3 |
| ynce family protein | VSVS05_RS03040 | Not Available | Positive | 637596 - 640568 | 112606.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | VSVS05_RS03045 | Not Available | Negative | 640651 - 642516 | 67987.1 |
| (2e,6e)-farnesyl diphosphate synthase | VSVS05_RS03050 | Not Available | Negative | 642537 - 643421 | 32456.1 |
| exodeoxyribonuclease vii small subunit | VSVS05_RS03055 | Not Available | Negative | 643442 - 643684 | 8826.15 |
| flagellar motor protein poma | VSVS05_RS03060 | Not Available | Positive | 643982 - 644743 | 27195.6 |
| flagellar motor protein motb | VSVS05_RS03065 | Not Available | Positive | 644756 - 645703 | 35383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



