Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gsph/fimt family pseudopilin | VSVS05_RS02775 | Not Available | Positive | 581186 - 581695 | 18347.2 |
| pilw family protein | VSVS05_RS02780 | Not Available | Positive | 581673 - 582311 | 23601.4 |
| hypothetical protein | VSVS05_RS02785 | Not Available | Positive | 582308 - 582796 | 18719.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS05_RS02790 | Not Available | Positive | 582786 - 583268 | 17166.8 |
| abgt family transporter | VSVS05_RS02795 | Not Available | Positive | 583520 - 585079 | 54772.2 |
| hemolysin family protein | VSVS05_RS02800 | Not Available | Positive | 585207 - 586487 | 47118.2 |
| trna adenosine(34) deaminase tada | VSVS05_RS02805 | Not Available | Positive | 586640 - 587152 | 18846.5 |
| hypothetical protein | VSVS05_RS22595 | Not Available | Negative | 587246 - 587380 | 5386.88 |
| membrane-bound lytic murein transglycosylase mltf | VSVS05_RS02810 | Not Available | Negative | 587663 - 589228 | 59046.8 |
| phosphoribosylformylglycinamidine synthase | VSVS05_RS02815 | Not Available | Positive | 589522 - 593433 | 142248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



